ASAP: analysis of peptide composition.

Serra-Hartmann, X; Rebordosa, X; Piñol, J; Querol, E; Martí-Renom, M A · Bioinformatics · 2000

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Abstract

ASAP is a web tool designed to search for specific dipeptides, tripeptides and tetrapeptides in a protein sequence database. The server allows for: (a) identification of frequent and infrequent peptides and the creation of peptide probability tables for a given database of sequences (GenerNet program), (b) determination of the compatibility of an amino-acid sequence to the given peptide probability tables (ClonErrNet program); and (c) comparison of different protein databases based on peptide composition (CompNet program). ASAP server can be useful in protein engineering and/or protein classification studies.

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