PALI: a database of alignments and phylogeny of homologous protein structures.
basic_science · Level V
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Abstract
PALI is a database of structure-based sequence alignments and phylogenetic relationships derived on the basis of three-dimensional structures of homologous proteins. This database enables grouping of pairs of homologous protein structures on the basis of their sequence identity calculated from the structure-based alignment and PALI also enables association of a new sequence to a family and automatic generation of a dendrogram combining the query sequence and homologous protein structures.
Medical subject headings
- Databases, Factual
- Proteins
- Sequence Alignment