PALI: a database of alignments and phylogeny of homologous protein structures.

Sujatha, S; Balaji, S; Srinivasan, N · Bioinformatics · 2001

basic_science · Level V

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Abstract

PALI is a database of structure-based sequence alignments and phylogenetic relationships derived on the basis of three-dimensional structures of homologous proteins. This database enables grouping of pairs of homologous protein structures on the basis of their sequence identity calculated from the structure-based alignment and PALI also enables association of a new sequence to a family and automatic generation of a dendrogram combining the query sequence and homologous protein structures.

Medical subject headings