STOCHSIM: modelling of stochastic biomolecular processes.
basic_science · Level V
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- Record sourced from PubMed, PMID 11395441.
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Abstract
STOCHSIM is a stochastic simulator for chemical reactions. Molecules are represented as individual software objects that react according to probabilities derived from concentrations and rate constants. Version 1.2 of STOCHSIM provides a novel cross-platform graphical interface written in Perl/Tk. A simple two-dimensional spatial structure has also been implemented, in which nearest-neighbour interactions of molecules in a 2-D lattice can be simulated.
Medical subject headings
- Computer Simulation
- Models, Chemical
- Software
- Stochastic Processes