STOCHSIM: modelling of stochastic biomolecular processes.

Le Novère, N; Shimizu, T S · Bioinformatics · 2001

basic_science · Level V

Where this comes from

Abstract

STOCHSIM is a stochastic simulator for chemical reactions. Molecules are represented as individual software objects that react according to probabilities derived from concentrations and rate constants. Version 1.2 of STOCHSIM provides a novel cross-platform graphical interface written in Perl/Tk. A simple two-dimensional spatial structure has also been implemented, in which nearest-neighbour interactions of molecules in a 2-D lattice can be simulated.

Medical subject headings