ProPred: prediction of HLA-DR binding sites.
basic_science · Level V
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- Record sourced from PubMed, PMID 11751237.
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Abstract
ProPred is a graphical web tool for predicting MHC class II binding regions in antigenic protein sequences. The server implement matrix based prediction algorithm, employing amino-acid/position coefficient table deduced from literature. The predicted binders can be visualized either as peaks in graphical interface or as colored residues in HTML interface. This server might be a useful tool in locating the promiscuous binding regions that can bind to several HLA-DR alleles. The server is available at http://www.imtech.res.in/raghava/propred/ raghava@imtech.res.in http://www.imtech.res.in/raghava/propred/page3.html
Medical subject headings
- Antigen Presentation
- HLA-DR Antigens
- Peptides
- Software