PROMO: detection of known transcription regulatory elements using species-tailored searches.

Messeguer, Xavier; Escudero, Ruth; Farré, Domènec; Núñez, Oscar; Martínez, Javier; Albà, M Mar · Bioinformatics · 2002

basic_science · Level V

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Abstract

We have developed a set of tools to construct positional weight matrices from known transcription factor binding sites in a species or taxon-specific manner, and to search for matches in DNA sequences.

Medical subject headings