ENDscript: a workflow to display sequence and structure information.
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Abstract
ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. http://genopole.toulouse.inra.fr/ENDscript
Medical subject headings
- Data Display
- Database Management Systems
- Information Storage and Retrieval
- Internet
- Sequence Analysis, Protein