A rapid method for illustrating features in both coding and non-coding regions of a genome.
other · Level V
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Abstract
A bitmap display of the Fourier spectra has been developed which allows convenient whole chromosome scanning for genes and other features. Use of a limited sliding window gives rapid visualization and localization of coding regions in the chromosomes, as well as non-coding features such as repetitive DNA. The method works particularly well on organisms with a skewed base composition, to provide an overview of genomic features.
Medical subject headings
- Algorithms
- Chromosome Mapping
- Computer Graphics
- Gene Expression Profiling
- Plasmodium falciparum
- Sequence Analysis, DNA
- Signal Processing, Computer-Assisted
- User-Computer Interface