G-PRIMER: greedy algorithm for selecting minimal primer set.
other · Level V
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- Record sourced from PubMed, PMID 15073009.
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Abstract
G-PRIMER, a web-based primer design program, has been developed to compute a minimal primer set specifically annealed to all the open reading frames in a given microbial genome. This program has been successfully used in the microarray experiment for analyzing the expression of genes in the Xanthomonas campestris genome. It is available at http://mammoth.bii.a-star.edu.sg/gprimer/. Its source code is available upon request.
Medical subject headings
- Algorithms
- Chromosome Mapping
- DNA Primers
- Oligonucleotide Array Sequence Analysis
- Sequence Alignment
- Sequence Analysis, DNA
- Software