Network structures and algorithms in Bioconductor.
review · Level V
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- Record sourced from PubMed, PMID 15297301.
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Abstract
In this paper, we review the central concepts and implementations of tools for working with network structures in Bioconductor. Interfaces to open source resources for visualization (AT&T Graphviz) and network algorithms (Boost) have been developed to support analysis of graphical structures in genomics and computational biology. Packages graph, Rgraphviz, RBGL of Bioconductor (www.bioconductor.org).
Medical subject headings
- Algorithms
- Computer Graphics
- Gene Expression Regulation
- Information Storage and Retrieval
- Models, Biological
- Signal Transduction
- Transcription Factors
- User-Computer Interface