Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A.

Khademi, Shahram; O'Connell, Joseph; Remis, Jonathan; Robles-Colmenares, Yaneth; Miercke, Larry J W; Stroud, Robert M · Science · 2004

basic_science · Level V

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Abstract

The first structure of an ammonia channel from the Amt/MEP/Rh protein superfamily, determined to 1.35 angstrom resolution, shows it to be a channel that spans the membrane 11 times. Two structurally similar halves span the membrane with opposite polarity. Structures with and without ammonia or methyl ammonia show a vestibule that recruits NH4+/NH3, a binding site for NH4+, and a 20 angstrom-long hydrophobic channel that lowers the NH4+ pKa to below 6 and conducts NH3. Favorable interactions for NH3 are seen within the channel and use conserved histidines. Reconstitution of AmtB into vesicles shows that AmtB conducts uncharged NH3.

Medical subject headings