CLUSTAG: hierarchical clustering and graph methods for selecting tag SNPs.
basic_science · Level V
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- Record sourced from PubMed, PMID 15585525.
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Abstract
Cluster and set-cover algorithms are developed to obtain a set of tag single nucleotide polymorphisms (SNPs) that can represent all the known SNPs in a chromosomal region, subject to the constraint that all SNPs must have a squared correlation R2>C with at least one tag SNP, where C is specified by the user. http://hkumath.hku.hk/web/link/CLUSTAG/CLUSTAG.html mng@maths.hku.hk.
Medical subject headings
- Algorithms
- Chromosome Mapping
- DNA Mutational Analysis
- Expressed Sequence Tags
- Pattern Recognition, Automated
- Polymorphism, Single Nucleotide
- Software