GPSDB: a new database for synonyms expansion of gene and protein names.
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Abstract
We present a new database, GPSDB (Gene and Protein Synonyms DataBase) which collects gene/protein names, in a species specific way, from 14 main biological resources. A web-based search interface gives access to the database: given a gene/protein name, it retrieves all synonyms for this entity and queries Medline with a set of user-selected terms. GPSDB is freely available from http://biomint.oefai.at/ johann@oefai.at.
Medical subject headings
- Database Management Systems
- Databases, Protein
- Information Dissemination
- Information Storage and Retrieval
- Natural Language Processing
- Proteins
- Terminology as Topic