A web-based three-dimensional protein retrieval system by matching visual similarity.

Yeh, Jeng-Sheng; Chen, Ding-Yun; Chen, Bing-Yu; Ouhyoung, Ming · Bioinformatics · 2005

basic_science · Level V

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Abstract

A web-based three-dimensional (3D) protein retrieval system is available for protein structure data including all PDB and FSSP dataset. In this system, we use a visual-based matching method to compare the protein structure from multiple viewpoints. It takes less than three seconds for each query with 90% accuracy on an average.

Medical subject headings