ORIOGEN: order restricted inference for ordered gene expression data.
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- Record sourced from PubMed, PMID 16109745.
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Abstract
ORIOGEN is a user-friendly Java-based software package for selecting and clustering genes according to their profiles across various treatment groups. In particular, ORIOGEN is useful for analyzing data obtained from time-course or dose-response type experiments. The ORIOGEN software can be downloaded freely from http://dir.niehs.nih.gov/dirbb/oriogen/index.cfm peddada@niehs.nih.gov (for statistical questions) and oriogen@constellagroup.com (for software support) ORIOGEN has a full set of help files. Also, an example input file is provided with the download.
Medical subject headings
- Algorithms
- Gene Expression Profiling
- Oligonucleotide Array Sequence Analysis
- Software
- User-Computer Interface