PIANA: protein interactions and network analysis.
basic_science · Level V
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- Record sourced from PubMed, PMID 16510498.
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Abstract
We present a software framework and tool called Protein Interactions And Network Analysis (PIANA) that facilitates working with protein interaction networks by (1) integrating data from multiple sources, (2) providing a library that handles graph-related tasks and (3) automating the analysis of protein-protein interaction networks. PIANA can also be used as a stand-alone application to create protein interaction networks and perform tasks such as predicting protein interactions and helping to identify spots in a 2D electrophoresis gel. PIANA is under the GNU GPL. Source code, database and detailed documentation may be freely downloaded from http://sbi.imim.es/piana.
Medical subject headings
- Database Management Systems
- Databases, Protein
- Information Storage and Retrieval
- Proteins
- Signal Transduction
- Software
- User-Computer Interface