Serial NetEvolve: a flexible utility for generating serially-sampled sequences along a tree or recombinant network.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 16844708.
- No licence information is recorded for this record.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
Serial NetEvolve is a flexible simulation program that generates DNA sequences evolved along a tree or recombinant network. It offers a user-friendly Windows graphical interface and a Windows or Linux simulator with a diverse selection of parameters to control the evolutionary model. Serial NetEvolve is a modification of the Treevolve program with the following additional features: simulation of serially-sampled data, the choice of either a clock-like or a variable rate model of sequence evolution, sampling from the internal nodes and the output of the randomly generated tree or network in our newly proposed NeTwick format. From website http://biorg.cis.fiu.edu/SNE Contacts: giri@cis.fiu.edu Manual and examples available from http://biorg.cis.fiu.edu/SNE.
Medical subject headings
- Algorithms
- Models, Genetic
- Recombination, Genetic
- Sequence Analysis, DNA
- Software
- User-Computer Interface