BioNetBuilder: automatic integration of biological networks.

Avila-Campillo, Iliana; Drew, Kevin; Lin, John; Reiss, David J; Bonneau, Richard · Bioinformatics · 2007

other · Level V

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Abstract

BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for approximately 1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases. http://err.bio.nyu.edu/cytoscape/bionetbuilder/

Medical subject headings