NetMatch: a Cytoscape plugin for searching biological networks.

Ferro, A; Giugno, R; Pigola, G; Pulvirenti, A; Skripin, D; Bader, G D; Shasha, D · Bioinformatics · 2007

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Abstract

NetMatch is a Cytoscape plugin which allows searching biological networks for subcomponents matching a given query. Queries may be approximate in the sense that certain parts of the subgraph-query may be left unspecified. To make the query creation process easy, a drawing tool is provided. Cytoscape is a bioinformatics software platform for the visualization and analysis of biological networks. The full package, a tutorial and associated examples are available at the following web sites: http://alpha.dmi.unict.it/~ctnyu/netmatch.html, http://baderlab.org/Software/NetMatch.

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