Single feature polymorphism discovery in rice.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 17372626.
- Also identified by PMC identifier 1808426.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
The discovery of nucleotide diversity captured as single feature polymorphism (SFP) by using the expression array is a high-throughput and effective method in detecting genome-wide polymorphism. The efficacy of such method was tested in rice, and the results presented in the paper indicate high sensitivity in predicting SFP. The sensitivity of polymorphism detection was further demonstrated by the fact that no biasness was observed in detecting SFP with either single or multiple nucleotide polymorphisms. The high density SFP data that can be generated quite effectively by the current method has promise for high resolution genetic mapping studies, as physical location of features are well-defined on rice genome.
Medical subject headings
- DNA, Plant
- Oryza
- Polymorphism, Genetic
- Polymorphism, Single Nucleotide