MAnGO: an interactive R-based tool for two-colour microarray analysis.

Marisa, Laetitia; Ichanté, Jean-Laurent; Reymond, Nancie; Aggerbeck, Lawrence; Delacroix, Hervé; Mucchielli-Giorgi, Marie-Hélène · Bioinformatics · 2007

other · Level V

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Abstract

MAnGO (Microarray Analysis at the Gif/Orsay platform) is an interactive R-based tool for the analysis of two-colour microarray experiments. It is a compilation of various methods, which allows the user (1) to control data quality by detecting biases with a large number of visual representations, (2) to pre-process data (filtering and normalization) and (3) to carry out differential analyses. MAnGO is not only a 'turn-key' tool, oriented towards biologists but also a flexible and adaptable R script oriented towards bioinformaticians. http://bioinfome.cgm.cnrs-gif.fr/.

Medical subject headings