Identification of potential HIV-1 targets of minocycline.

Jenwitheesuk, Ekachai; Samudrala, Ram · Bioinformatics · 2007

basic_science · Level V

Where this comes from

Abstract

Minocycline, a broad spectrum antibiotic, has been discovered to have inhibitory activity against HIV-1 in vitro, but the targets inhibited are unknown. We used a docking with dynamics protocol developed by us to predict the binding affinities of minocycline against seven active sites of five HIV-1 proteins to putatively identify the potential target(s) of minocycline. The results indicate that minocycline has the highest predicted binding affinity against HIV-1 integrase.

Medical subject headings