Phyutility: a phyloinformatics tool for trees, alignments and molecular data.

Abstract

Phyutility provides a set of phyloinformatics tools for summarizing and manipulating phylogenetic trees, manipulating molecular data and retrieving data from NCBI. Its simple command-line interface allows for easy integration into scripted analyses, and is able to handle large datasets with an integrated database. Phyutility, including source code, documentation, examples, and executables, is available at http://code.google.com/p/phyutility.