Dimensionality and dynamics in the behavior of C. elegans.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 18389066.
- Also identified by DOI 10.1371/journal.pcbi.1000028 and PMC identifier 2276863.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
A major challenge in analyzing animal behavior is to discover some underlying simplicity in complex motor actions. Here, we show that the space of shapes adopted by the nematode Caenorhabditis elegans is low dimensional, with just four dimensions accounting for 95% of the shape variance. These dimensions provide a quantitative description of worm behavior, and we partially reconstruct "equations of motion" for the dynamics in this space. These dynamics have multiple attractors, and we find that the worm visits these in a rapid and almost completely deterministic response to weak thermal stimuli. Stimulus-dependent correlations among the different modes suggest that one can generate more reliable behaviors by synchronizing stimuli to the state of the worm in shape space. We confirm this prediction, effectively "steering" the worm in real time.
Medical subject headings
- Behavior, Animal
- Caenorhabditis elegans
- Gait
- Locomotion
- Models, Biological