A toolkit for analysing large-scale plant small RNA datasets.
other · Level V
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- Record sourced from PubMed, PMID 18713789.
- Also identified by DOI 10.1093/bioinformatics/btn428.
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Abstract
Recent developments in high-throughput sequencing technologies have generated considerable demand for tools to analyse large datasets of small RNA sequences. Here, we describe a suite of web-based tools for processing plant small RNA datasets. Our tools can be used to identify micro RNAs and their targets, compare expression levels in sRNA loci, and find putative trans-acting siRNA loci. The tools are freely available for use at http://srna-tools.cmp.uea.ac.uk.
Medical subject headings
- MicroRNAs
- RNA, Plant
- Software