DOCKGROUND protein-protein docking decoy set.
basic_science · Level V
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- Record sourced from PubMed, PMID 18812365.
- Also identified by DOI 10.1093/bioinformatics/btn497 and PMC identifier 2579708.
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Abstract
A protein-protein docking decoy set is built for the Dockground unbound benchmark set. The GRAMM-X docking scan was used to generate 100 non-native and at least one near-native match per complex for 61 complexes. The set is a publicly available resource for the development of scoring functions and knowledge-based potentials for protein docking methodologies. The decoys are freely available for download at http://dockground.bioinformatics.ku.edu/UNBOUND/decoy/decoy.php
Medical subject headings
- Computational Biology
- Protein Interaction Mapping
- Proteins
- Software