A large genome center's improvements to the Illumina sequencing system.

Quail, Michael A; Kozarewa, Iwanka; Smith, Frances; Scally, Aylwyn; Stephens, Philip J; Durbin, Richard; Swerdlow, Harold; Turner, Daniel J · Nat Methods · 2008

basic_science · Level V

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Abstract

The Wellcome Trust Sanger Institute is one of the world's largest genome centers, and a substantial amount of our sequencing is performed with 'next-generation' massively parallel sequencing technologies: in June 2008 the quantity of purity-filtered sequence data generated by our Genome Analyzer (Illumina) platforms reached 1 terabase, and our average weekly Illumina production output is currently 64 gigabases. Here we describe a set of improvements we have made to the standard Illumina protocols to make the library preparation more reliable in a high-throughput environment, to reduce bias, tighten insert size distribution and reliably obtain high yields of data.

Medical subject headings