ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 19237447.
- Also identified by DOI 10.1093/bioinformatics/btp101 and PMC identifier 2666812.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
We have developed ClueGO, an easy to use Cytoscape plug-in that strongly improves biological interpretation of large lists of genes. ClueGO integrates Gene Ontology (GO) terms as well as KEGG/BioCarta pathways and creates a functionally organized GO/pathway term network. It can analyze one or compare two lists of genes and comprehensively visualizes functionally grouped terms. A one-click update option allows ClueGO to automatically download the most recent GO/KEGG release at any time. ClueGO provides an intuitive representation of the analysis results and can be optionally used in conjunction with the GOlorize plug-in.
Medical subject headings
- Computational Biology
- Gene Regulatory Networks
- Software