DIYA: a bacterial annotation pipeline for any genomics lab.
Where this comes from
- Record sourced from PubMed, PMID 19254921.
- Also identified by DOI 10.1093/bioinformatics/btp097 and PMC identifier 2660880.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline software, written in Perl, used for the rapid annotation of bacterial genome sequences. The software is currently used to take DNA contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence in Genbank file format as output. Distribution and source code are available at (https://sourceforge.net/projects/diyg/). Supplementary data are available at Bioinformatics online.
Medical subject headings
- Genome, Bacterial
- Genomics
- Software