Synergy Disequilibrium Plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 19297347.
- Also identified by DOI 10.1093/bioinformatics/btp159 and PMC identifier 2682510.
- Licence recorded as CC BY-NC.
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Abstract
We present a visualization tool applied on genome-wide association data, revealing disease-associated haplotypes, epistatically interacting loci, as well as providing visual signatures of multivariate correlations of genetic markers with respect to a phenotype. Freely available on the web at: (http://www.ee.columbia.edu/~anastas/sdplots).
Medical subject headings
- Computational Biology
- Computer Graphics
- Phenotype
- Polymorphism, Single Nucleotide