BIPA: a database for protein-nucleic acid interaction in 3D structures.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 19357098.
- Also identified by DOI 10.1093/bioinformatics/btp243.
- No licence information is recorded for this record.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
BIPA is a database for protein-nucleic acid interactions in 3D structures. The database provides various physicochemical features of protein-nucleic acid interface such as size, shape, residue propensity, secondary structure composition and intermolecular interactions. The database also contains multiple structural alignments of nucleic acid-binding protein families with annotations of local environments in order to allow definition of features that influence acceptability of mutations at a particular position in a protein family. A web interface has been designed to present the results of these analyses and facilitate navigation of protein-nucleic acid interfaces. http://www-cryst.bioc.cam.ac.uk/bipa Supplementary data are available at Bioinformatics online.
Medical subject headings
- Computational Biology
- DNA-Binding Proteins
- Databases, Protein
- RNA-Binding Proteins
- Software