Generating linkage mapping files from Affymetrix SNP chip data.
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- Record sourced from PubMed, PMID 19435744.
- Also identified by DOI 10.1093/bioinformatics/btp313.
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Abstract
LINKDATAGEN is a perl tool that generates linkage mapping input files for five different linkage mapping tools using data from all 11 HAPMAP Phase III populations. It provides rudimentary error checks and is easily amended for personal linkage mapping preferences. LINKDATAGEN is available from http://bioinf.wehi.edu.au/software/linkdatagen/ with accompanying annotation files, reference manual and test dataset.
Medical subject headings
- Chromosome Mapping
- Polymorphism, Single Nucleotide
- Software