rtracklayer: an R package for interfacing with genome browsers.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 19468054.
- Also identified by DOI 10.1093/bioinformatics/btp328 and PMC identifier 2705236.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
The rtracklayer package supports the integration of existing genome browsers with experimental data analyses performed in R. The user may (i) transfer annotation tracks to and from a genome browser and (ii) create and manipulate browser views to focus on a particular set of annotations in a specific genomic region. Currently, the UCSC genome browser is supported. The package is freely available from http://www.bioconductor.org/. A quick-start vignette is included with the package.
Medical subject headings
- Genome
- Genomics
- Software