Reordering contigs of draft genomes using the Mauve aligner.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 19515959.
- Also identified by DOI 10.1093/bioinformatics/btp356 and PMC identifier 2723005.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results. The software is available for download at http://gel.ahabs.wisc.edu/mauve.
Medical subject headings
- Algorithms
- Contig Mapping
- Genome
- Sequence Alignment
- Software