FBA-SimVis: interactive visualization of constraint-based metabolic models.
Where this comes from
- Record sourced from PubMed, PMID 19578041.
- Also identified by DOI 10.1093/bioinformatics/btp408 and PMC identifier 2759546.
- Licence recorded as CC BY-NC.
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Abstract
FBA-SimVis is a VANTED plug-in for the constraint-based analysis of metabolic models with special focus on the visual exploration of metabolic flux data resulting from model analysis. The program provides a user-friendly environment for model reconstruction, constraint-based model analysis, and interactive visualization of the simulation results. With the ability to quantitatively analyse metabolic fluxes in an interactive and visual manner, FBA-SimVis supports a comprehensive understanding of constraint-based metabolic flux models in both overview and detail. Software with manual and tutorials are freely available at http://fbasimvis.ipk-gatersleben.de/
Medical subject headings
- Computational Biology
- Metabolic Networks and Pathways
- Software