CD-HIT Suite: a web server for clustering and comparing biological sequences.
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Where this comes from
- Record sourced from PubMed, PMID 20053844.
- Also identified by DOI 10.1093/bioinformatics/btq003 and PMC identifier 2828112.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
CD-HIT is a widely used program for clustering and comparing large biological sequence datasets. In order to further assist the CD-HIT users, we significantly improved this program with more functions and better accuracy, scalability and flexibility. Most importantly, we developed a new web server, CD-HIT Suite, for clustering a user-uploaded sequence dataset or comparing it to another dataset at different identity levels. Users can now interactively explore the clusters within web browsers. We also provide downloadable clusters for several public databases (NCBI NR, Swissprot and PDB) at different identity levels. Free access at http://cd-hit.org
Medical subject headings
- Sequence Analysis
- Software