Draft genome sequence of the oilseed species Ricinus communis.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 20729833.
- Also identified by DOI 10.1038/nbt.1674 and PMC identifier 2945230.
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Abstract
Castor bean (Ricinus communis) is an oilseed crop that belongs to the spurge (Euphorbiaceae) family, which comprises approximately 6,300 species that include cassava (Manihot esculenta), rubber tree (Hevea brasiliensis) and physic nut (Jatropha curcas). It is primarily of economic interest as a source of castor oil, used for the production of high-quality lubricants because of its high proportion of the unusual fatty acid ricinoleic acid. However, castor bean genomics is also relevant to biosecurity as the seeds contain high levels of ricin, a highly toxic, ribosome-inactivating protein. Here we report the draft genome sequence of castor bean (4.6-fold coverage), the first for a member of the Euphorbiaceae. Whereas most of the key genes involved in oil synthesis and turnover are single copy, the number of members of the ricin gene family is larger than previously thought. Comparative genomics analysis suggests the presence of an ancient hexaploidization event that is conserved across the dicotyledonous lineage.
Medical subject headings
- Base Sequence
- Ricinus communis
- Ricinus communis/genetics
- Genes, Plant
- Genes, Plant/genetics
- Genome, Plant
- Genome, Plant/genetics
- Immunity, Innate
- Immunity, Innate/genetics
- Molecular Sequence Annotation
- Multigene Family
- Multigene Family/genetics
- Plant Oils
- Plant Oils/metabolism
- Polyploidy
- Protein Structure, Tertiary
- Repetitive Sequences, Nucleic Acid
- Repetitive Sequences, Nucleic Acid/genetics
- Ricin
- Ricin/chemistry
- Ricin/genetics
- Seeds
- Seeds/genetics
- Sequence Analysis, DNA