Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 21186248.
- Also identified by DOI 10.1093/bioinformatics/btq720.
- No licence information is recorded for this record.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
We present Voroprot, an interactive cross-platform software tool that provides a unique set of capabilities for exploring geometric features of protein structure. Voroprot allows the construction and visualization of the Apollonius diagram (also known as the additively weighted Voronoi diagram), the Apollonius graph, protein alpha shapes, interatomic contact surfaces, solvent accessible surfaces, pockets and cavities inside protein structure. Voroprot is available for Windows, Linux and Mac OS X operating systems and can be downloaded from http://www.ibt.lt/bioinformatics/voroprot/.
Medical subject headings
- Imaging, Three-Dimensional
- Models, Molecular
- Proteins
- Software