ESS++: a C++ objected-oriented algorithm for Bayesian stochastic search model exploration.

Bottolo, Leonardo; Chadeau-Hyam, Marc; Hastie, David I; Langley, Sarah R; Petretto, Enrico; Tiret, Laurence; Tregouet, David; Richardson, Sylvia · Bioinformatics · 2011

basic_science · Level V

Where this comes from

Abstract

ESS++ is a C++ implementation of a fully Bayesian variable selection approach for single and multiple response linear regression. ESS++ works well both when the number of observations is larger than the number of predictors and in the 'large p, small n' case. In the current version, ESS++ can handle several hundred observations, thousands of predictors and a few responses simultaneously. The core engine of ESS++ for the selection of relevant predictors is based on Evolutionary Monte Carlo. Our implementation is open source, allowing community-based alterations and improvements. C++ source code and documentation including compilation instructions are available under GNU licence at http://bgx.org.uk/software/ESS.html.

Medical subject headings