ncIDP-assign: a SPARKY extension for the effective NMR assignment of intrinsically disordered proteins.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 21372082.
- Also identified by DOI 10.1093/bioinformatics/btr054 and PMC identifier 3065690.
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Abstract
We describe here the ncIDP-assign extension for the popular NMR assignment program SPARKY, which aids in the sequence-specific resonance assignment of intrinsically disordered proteins (IDPs). The assignment plugin greatly facilitates the effective matching of a set of connected resonances to the correct position in the sequence by making use of IDP random coil chemical shifts. The ncIDP-assign extension is available at http://www.protein-nmr.org/.
Medical subject headings
- Nuclear Magnetic Resonance, Biomolecular
- Protein Conformation
- Software