RuleBender: a visual interface for rule-based modeling.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 21493655.
- Also identified by DOI 10.1093/bioinformatics/btr197 and PMC identifier 3106190.
- No licence information is recorded for this record.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
Rule-based modeling (RBM) is a powerful and increasingly popular approach to modeling intracellular biochemistry. Current interfaces for RBM are predominantly text-based and command-line driven. Better visual tools are needed to make RBM accessible to a broad range of users, to make specification of models less error prone and to improve workflows. We present RULEBENDER, an open-source visual interface that facilitates interactive debugging, simulation and analysis of RBMs. RULEBENDER is freely available for Mac, Windows and Linux at http://rulebender.org.
Medical subject headings
- Models, Biological
- Software