An allosteric mechanism inferred from molecular dynamics simulations on phospholamban pentamer in lipid membranes.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 21525996.
- Also identified by DOI 10.1371/journal.pone.0018587 and PMC identifier 3078132.
- Licence recorded as CC BY.
- The licence permits redistribution, so the abstract is shown in full and the full text is available from the publisher.
Abstract
Phospholamban functions as a regulator of Ca(2+) concentration of cardiac muscle cells by triggering the bioactivity of sarcoplasmic reticulum Ca(2+)-ATPase. In order to understand its dynamic mechanism in the environment of bilayer surroundings, we performed long time-scale molecular dynamic simulations based on the high-resolution NMR structure of phospholamban pentamer. It was observed from the molecular dynamics trajectory analyses that the conformational transitions between the "bellflower" and "pinwheel" modes were detected for phospholamban. Particularly, the two modes became quite similar to each other after phospholamban was phosphorylated at Ser16. Based on these findings, an allosteric mechanism was proposed to elucidate the dynamic process of phospholamban interacting with Ca(2+)-ATPase.
Medical subject headings
- Calcium-Binding Proteins
- Lipid Bilayers
- Molecular Dynamics Simulation
- Protein Multimerization