rBioNet: A COBRA toolbox extension for reconstructing high-quality biochemical networks.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 21596791.
- Also identified by DOI 10.1093/bioinformatics/btr308.
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Abstract
Genome-scale metabolic networks are widely used in systems biology. However, to date no freely available tool exists that ensures quality control during the reconstruction process. Here, we present a COBRA toolbox extension, rBioNet, enabling the construction of publication-level biochemical networks while enforcing necessary quality control measures. rBioNet has an intuitive user interface facilitating the reconstruction process for novices and experts. The rBioNet is freely available from http://opencobra.sourceforge.net.
Medical subject headings
- Metabolic Networks and Pathways
- Software