TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata.
Where this comes from
- Record sourced from PubMed, PMID 21903626.
- Also identified by DOI 10.1093/bioinformatics/btr517 and PMC identifier 3198578.
- Licence recorded as CC BY-NC.
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Abstract
Microbial community profiling is a highly active area of research, but tools that facilitate visualization of phylogenetic trees and associated environmental data have not kept up with the increasing quantity of data generated in these studies. TopiaryExplorer supports the visualization of very large phylogenetic trees, including features such as the automated coloring of branches by environmental data, manipulation of trees and incorporation of per-tip metadata (e.g. taxonomic labels). http://topiaryexplorer.sourceforge.net. rob.knight@colorado.edu.
Medical subject headings
- Phylogeny
- Software