GOHTAM: a website for 'Genomic Origin of Horizontal Transfers, Alignment and Metagenomics'.
other · Level V
Where this comes from
- Record sourced from PubMed, PMID 22426345.
- Also identified by DOI 10.1093/bioinformatics/bts118 and PMC identifier 3338014.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
This website allows the detection of horizontal transfers based on a combination of parametric methods and proposes an origin by researching neighbors in a bank of genomic signatures. This bank is also used to research an origin to DNA fragments from metagenomics studies. Different services are provided like the possibility of inferring a phylogenetic tree with sequence signatures or comparing two genomes and displaying the rearrangements that happened since their separation. http://gohtam.rpbs.univ-paris-diderot.fr/
Medical subject headings
- Gene Transfer, Horizontal
- Metagenomics
- Phylogeny