graph2tab, a library to convert experimental workflow graphs into tabular formats.
Where this comes from
- Record sourced from PubMed, PMID 22556367.
- Also identified by DOI 10.1093/bioinformatics/bts258 and PMC identifier 3371871.
- Licence recorded as CC BY-NC.
- Because redistribution is not established, this page shows the abstract only. Follow the links below for the full text.
Abstract
Spreadsheet-like tabular formats are ever more popular in the biomedical field as a mean for experimental reporting. The problem of converting the graph of an experimental workflow into a table-based representation occurs in many such formats and is not easy to solve. We describe graph2tab, a library that implements methods to realise such a conversion in a size-optimised way. Our solution is generic and can be adapted to specific cases of data exporters or data converters that need to be implemented. The library source code and documentation are available at http://github.com/ISA-tools/graph2tab.
Medical subject headings
- Computer Graphics
- Programming Languages
- Workflow