NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets.

Breese, Marcus R; Liu, Yunlong · Bioinformatics · 2013

other · Level V

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Abstract

NGSUtils is a suite of software tools for manipulating data common to next-generation sequencing experiments, such as FASTQ, BED and BAM format files. These tools provide a stable and modular platform for data management and analysis. NGSUtils is available under a BSD license and works on Mac OS X and Linux systems. Python 2.6+ and virtualenv are required. More information and source code may be obtained from the website: http://ngsutils.org.

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