DAPPLE: a pipeline for the homology-based prediction of phosphorylation sites.

Abstract

While many experimentally characterized phosphorylation sites exist for certain organisms, such as human, rat and mouse, few sites are known for other organisms, hampering related research efforts. We have developed a software pipeline called DAPPLE that automates the process of using known phosphorylation sites from other organisms to identify putative sites in an organism of interest. DAPPLE is available as a web server at http://saphire.usask.ca. Supplementary data are available at Bioinformatics online.