REDItools: high-throughput RNA editing detection made easy.
basic_science · Level V
Where this comes from
- Record sourced from PubMed, PMID 23742983.
- Also identified by DOI 10.1093/bioinformatics/btt287.
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Abstract
The reliable detection of RNA editing sites from massive sequencing data remains challenging and, although several methodologies have been proposed, no computational tools have been released to date. Here, we introduce REDItools a suite of python scripts to perform high-throughput investigation of RNA editing using next-generation sequencing data. REDItools are in python programming language and freely available at http://code.google.com/p/reditools/. ernesto.picardi@uniba.it or graziano.pesole@uniba.it Supplementary data are available at Bioinformatics online.
Medical subject headings
- High-Throughput Nucleotide Sequencing
- RNA Editing
- Software