RDAVIDWebService: a versatile R interface to DAVID.
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Where this comes from
- Record sourced from PubMed, PMID 23958726.
- Also identified by DOI 10.1093/bioinformatics/btt487.
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Abstract
The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization. RDAVIDWebService is available as an R package from the Bioconductor project (www.bioconductor.org) and on the authors' Web site (www.bdmg.com.ar) under GPL-2 license, subjected to the terms of use of DAVID (http://david.abcc.ncifcrf.gov/content.jsp?file=WS.html). cfresno@bdmg.com.ar or efernandez@bdmg.com.ar.
Medical subject headings
- Databases, Genetic
- Software