RNA secondary structure diagrams for very large molecules: RNAfdl.
Where this comes from
- Record sourced from PubMed, PMID 23975766.
- Also identified by DOI 10.1093/bioinformatics/btt496.
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Abstract
There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 10(3) bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats. Source code is available under the GNU General Public License v3.0 at http://sourceforge.net/projects/rnafdl for Linux and similar systems or Windows using MinGW. RNAfdl is implemented in C, uses the Cairo 2D graphics library and offers both command line and graphical user interfaces. hecker@rth.dk
Medical subject headings
- RNA
- Software